Publications

Biomedical Knowledge Engineering Laboratory

International Journal Publications

  1. Li R, Xu J, Cao Z, Zheng H-T, Kim H-G. Extending Context Window in Large Language Models with Segmented Base Adjustment for Rotary Position Embeddings. Applied Sciences. 2024; 14(7):3076. [10.3390/app14073076]
  2. Hyunwhan Joe, Hong-Gee Kim. 2024. “Multi-label classification with XGBoost for metabolic pathway prediction”. BMC Bioinformatics 25, 52. [10.1186/s12859-024-05666-0]
  3. Hai-Tao Zheng, Zuotong Xie, Wenqiang Liu, Dongxiao Huang, Bei Wu, Hong-Gee Kim. 2023. “Prompt Learning with Structured Semantic Knowledge Makes Pre-trained Language Models Better”. Electronics 12(15), 3281.  [10.3390/electronics12153281]
  4. Xuan Fu, Jiangnan Du, Hai-Tao Zheng, Jianfeng Li, Cuiqin Hou, Qiyu Zhou, Hong-Gee Kim. 2023. “SS-BERT: A Semantic Information Selecting Approach for Open-Domain Question Answering”. Electronics 12(7), 1692. [10.3390/electronics12071692]
  5. Sungmin Yang, Kyungsik Ha, Woojeung Song, Masashi Fujita, Kirsten Kübler, Paz Polak, Eiso Hiyama, Hidewaki Nakagawa, Hong-Gee Kim and Hwajin Lee. 2022. “COOBoostR: An Extreme Gradient Boosting-Based Tool for Robust Tissue or Cell-of-Origin Prediction of Tumors”. Life 13(1), 71. [10.3390/life13010071]
  6. Min-Koo Park , Jin-Muk Lim, Jinwoo Jeong , Yeongjae Jang, Ji-Won Lee, Jeong-Chan Lee, Hyungyu Kim, Euiyul Koh, Sung-Joo Hwang, Hong-Gee Kim and Keun-Cheol Kim. 2022. “Deep-Learning Algorithm and Concomitant Biomarker Identification for NSCLC Prediction Using Multi-Omics Data Integration”. Biomolecules 12(12), 1839. [10.3390/biom12121839]
  7. Munhwan Lee, Pil-Jong Kim, Hyunwhan Joe, Hong-Gee Kim. 2022.  “Gene-centric multi-omics integration with convolutional encoders for cancer drug response prediction”. Computers in Biology and Medicine 151A. [10.1016/j.compbiomed.2022.106192]
  8. Hyun-Jung Kim, Woo-Jin Kim, Hye-Rim Shin, Hee-In Yoon, Jae-I Moon, Eunji Lee, Jin-Muk Lim, Young-Dan Cho, Mi-Hye Lee, Hong-Gee Kim, Hyun-Mo Ryoo. 2022. “ROS-induced PADI2 downregulation accelerates cellular senescence via the stimulation of SASP production and NFκB activation”. Cellular and Molecular Life Sciences 79, 155. [10.1007/s00018-022-04186-5]
  9. Yongsun Shim, Munhwan Lee, Pil-Jong Kim and Hong-Gee Kim. 2022. “A novel approach to predicting the synergy of anti-cancer drug combinations using document-based feature extraction”. BMC Bioinformatics 23, 163. [10.1186/s12859-022-04698-8]
  10. Wen-Rui Cao, Prabin Shakya, Biraj Karmacharya, Dong Roman Xu, Yuan-Tao Hao, and Ying-Si Lai. 2021. “Equity of geographical access to public health facilities in Nepal”. BMJ Global Health 6, 10. [10.1136/bmjgh-2021-006786]
  11. Jieun Kim, Prabin Raj Shakya, Sugy Choi, Joong Shin Park, Suman Raj Tamrakar, Jongho Heo & Woong-Han Kim. 2021. “An evaluation of obstetric ultrasound education program in Nepal using the RE-AIM framework”. BMC Medical Education 21, 57. [10.1186/s12909-021-02484-3]
  12. Moon-Jong Kim, Pil-Jong Kim, Hong-Gee Kim & Hong-Seop Kho. 2021. “Prediction of treatment outcome in burning mouth syndrome patients using machine learning based on clinical data”. Scientific Reports 11, 15396. [10.1038/s41598-021-94940-9]
  13. Heon-Mook Park, Pil-Jong Kim, Joohon Sung, Yun-Mi Song, Hong-Gee Kim, Young Ho Kim, Seung-Hak Baek. 2021. “Differences in the heritability of craniofacial skeletal and dental characteristics between twin pairs with skeletal Class I and II malocclusions”. The Korean Journal of Orthodontics 51, 6. [10.4041/kjod.2021.51.6.407]
  14. Young-Dan Cho, Woo-Jin Kim, Hyun-Mo Ryoo, Hong-Gee Kim, Kyoung-Hwa Kim, Young Ku & Yang-Jo Seol. 2021. “Current advances of epigenetics in periodontology from ENCODE project: a review and future perspectives”. Clinical Epigenetics 13, 92. [s13148-021-01074-w]
  15. Jinuk Jung, Hyunwhan Joe, Kyungsik Ha, Jin-muk Lim, and Hong-gee Kim. 2021. “Biomedical Entity Explorer: A Web Server for Biomedical Entity Exploration.” Journal of Computational Biology. [10.1089/cmb.2020.0364.]
  16. Kyungmin Lee, Hyunwhan Joe, Hyeontaek Lim, Kwangyoun Kim, Sungsoo Kim, Chang Woo Han, Hong-Gee Kim. 2021. “Sequential Routing Framework: Fully Capsule Network-based Speech Recognition.” Computer Speech and Language 70 (C): 10228. [10.1016/j.csl.2021.101228]
  17. Lee, Ahreum, Junshik Hong, Dong-Yeop Shin, Youngil Koh, Sung-Soo Yoon, Pil-Jong Kim, Hong-Gee Kim, Inho Kim, Hee-Kyung Park, and Youngnim Choi. 2020. “Association of HSV-1 and Reduced Oral Bacteriota Diversity with Chemotherapy-Induced Oral Mucositis in Patients Undergoing Autologous Hematopoietic Stem Cell Transplantation.” Journal of Clinical Medicine 9 (4): 1090. [10.3390/jcm9041090]
  18. Cho, Young-Dan, Pil-Jong Kim, Hong-Gee Kim, Yang-Jo Seol, Yong-Moo Lee, Hyun-Mo Ryoo, and Young Ku. 2020. “Transcriptome and Methylome Analysis of Periodontitis and Peri-Implantitis with Tobacco Use.” Gene 727 (February): 144258. [10.1016/j.gene.2019.144258]
  19. Lee, Ji-Min, Pil-Jong Kim, Hong-Gee Kim, Hong-Keun Hyun, Young Jae Kim, Jung-Wook Kim, and Teo Jeon Shin. 2020. “Analysis of Brain Connectivity during Nitrous Oxide Sedation Using Graph Theory.” Scientific Reports 10 (1). [10.1038/s41598-020-59264-0]
  20. Park, Jee Young, Pil‐Jong Kim, Su‐Jin Shin, Jae‐Lyun Lee, Yong Mee Cho, and Heounjeong Go. 2020. “FGFR1 Is Associated with C‐MYC and Proangiogenic Molecules in Metastatic Renal Cell Carcinoma under Anti‐angiogenic Therapy.” Histopathology 76 (6): 838–51. [10.1111/his.14076]
  21. Go, Heounjeong, Ji-Young Jang, Chul-Woo Kim, Jooryung Huh, Pil-Jong Kim, and Yoon Kyung Jeon. 2019. “Identification of MicroRNAs Modulated by DNA Hypomethylating Drugs in Extranodal NK/T-Cell Lymphoma.” Leukemia & Lymphoma 61 (1): 66–74.  [10.1080/10428194.2019.1654096]
  22. ‌Lin, Guang, Pil-Jong Kim, Seung-Hak Baek, Hong-Gee Kim, Suk-Wha Kim, and Jee-Hyeok Chung. 2020. “Early Prediction of the Need for Orthognathic Surgery in Patients With Repaired Unilateral Cleft Lip and Palate Using Machine Learning and Longitudinal Lateral Cephalometric Analysis Data.” Journal of Craniofacial Surgery Publish Ahead of Print (August). [10.1097/SCS.0000000000006943]
  23. Kenta Kawasaki, Kohta Toshimitsu, Mami Matano, Masashi Fujita, Masayuki Fujii, Kazuhiro Togasaki, Toshiki Ebisudani, Mariko Shimokawa, Ai Takano, Sirirat Takahashi, Yuki Ohta, Kosaku Nanki, Ryo Igarashi, Kazuhiro Ishimaru, Hiroki Ishida, Yasutaka Sukawa, Shinya Sugimoto, Yoshimasa Saito, Kazuhiro Maejima, Shota Sasagawa, Hwajin Lee, Kyungsik Ha, Hong-Gee Kim, Junko Hamamoto, Koichi Fukunaga, Aya Maekawa, Minoru Tanabe, Soichiro Ishihara, Yasuo Hamamoto, Hiroyuki Yasuda, Shigeki Sekine, Atsushi Kudo, Yuko Kitagawa, Takanori Kanai, Hidewaki Nakagawa, Toshiro Sato. 2020. “An Organoid Biobank of Rare Human Neuroendocrine Neoplasms Enables Genotype-Phenotype Mapping.” Cell. [10.1016/j.cell.2020.10.023]
  24. Kyungsik Ha, Masashi Fujita, Rosa Karlić, Sungmin Yang, Ruidong Xue, Chong Zhang, Fan Bai, Ning Zhang, Yujin Hoshida, Paz Polak, Hidewaki Nakagawa, Hong-Gee Kim and Hwajin Lee. 2020. “Somatic mutation landscape reveals differential variability of cell-of-origin for primary liver cancer.” Heliyon 6(2). [10.1016/j.heliyon.2020.e03350]
  25. Park, Soonbum, Jin‑Muk Lim, Jung Chun, Sanghoon Lee, Tae Kim, Dong‑Wan Kim, Sang‑Yeob Kim, Dong‑Jun Bae, Sang‑Mun Bae, Insuk So, Hong‑Gee Kim, Ji‑Yeob Choi, and Ju‑Hong Jeon. 2020. “Altered Expression of Fucosylation Pathway Genes Is Associated with Poor Prognosis and Tumor Metastasis in Non‑small Cell Lung Cancer.” International Journal of Oncology. [10.3892/ijo.2019.4953]
  26. Kim, J. W., Kim, P. J., Kim, H. G., & Shin, T. J. (2019). Changes of auditory stimulus processing in sevoflurane-induced sedation. Neuroscience letters, 698, 121-125. [10.1016/j.neulet.2019.01.018]
  27. Lim, Jaeseo*, Hyunwoong Ko*, Ji Won Yang, Songeui Kim, Seunghee Lee, Myung-Sun Chun, Jungjoon Ihm, and Jooyong Park. 2019. “Active Learning through Discussion: ICAP Framework for Education in Health Professions.” BMC Medical Education 19(1):477.  [10.1186/s12909-019-1901-7]
  28. Go, Heounjeong, Mun Jung Kang, Pil-Jong Kim, Jae-Lyun Lee, Ji Y. Park, Ja-Min Park, Jae Y. Ro, and Yong Mee Cho. 2019. “Development of Response Classifier for Vascular Endothelial Growth Factor Receptor (VEGFR)-Tyrosine Kinase Inhibitor (TKI) in Metastatic Renal Cell Carcinoma.” Pathology Oncology Research : POR 25(1):51–58. [10.1007/s12253-017-0323-2]
  29. Kim, Pil-Jong, Hong-Gee Kim, and Teo Jeon Shin. 2019. “The Disturbance in Dynamic Property in the Reconstructed State Space during Nitrous Oxide Administration.” Neuroreport 30(3):162–68. [10.1097/WNR.0000000000001177]
  30. Ko, Hyunwoong, Jung-Joon Ihm, and Hong-Gee Kim. 2019. “Cognitive Profiling Related to Cerebral Amyloid Beta Burden Using Machine Learning Approaches.” Frontiers in Aging Neuroscience 11. [10.3389/fnagi.2019.00095]
  31. Lee, Munhwan, Hyeyeon Kim, Hyunwhan Joe, and Hong-Gee Kim. 2019. “Multi-Channel PINN: Investigating Scalable and Transferable Neural Networks for Drug Discovery.” Journal of Cheminformatics 11(1):46. [10.1186/s13321-019-0368-1]
  32. Ji, Young A., Se Jin Nam, Hong Gee Kim, Jaeil Lee, and Soo-Kyoung Lee. 2018. “Research Topics and Trends in Medical Education by Social Network Analysis.” BMC Medical Education 18(1):222. [10.1186/s12909-018-1323-y]
  33. Nam, Y., H. G. Kim, and H. S. Kho. 2018. “Differential Diagnosis of Jaw Pain Using Informatics Technology.” Journal of Oral Rehabilitation 45(8):581–88. [10.1111/joor.12655]
  34. Ahn, Jinhyun, Jae-Hong Eom, Sejin Nam, Nansu Zong, Dong-Hyuk Im, and Hong-Gee Kim. 2017. “XStore : Federated Temporal Query Processing for Large Scale RDF Triples on a Cloud Environment.” Neurocomputing 256:5–12. [10.1016/j.neucom.2016.03.116]
  35. Ahn, Jinhyun, Dong-Hyuk Im, Taewhi Lee, and Hong-Gee Kim. 2017. “A Dynamic and Parallel Approach for Repetitive Prime Labeling of XML with MapReduce.” The Journal of Supercomputing 73(2):810–36. [10.1007/s11227-016-1803-y]
  36. Cho, Young-Dan, Pil-Jong Kim, Hong-Gee Kim, Yang-Jo Seol, Yong-Moo Lee, Young Ku, In-Chul Rhyu, and Hyun-Mo Ryoo. 2017. “Transcriptomics and Methylomics in Chronic Periodontitis with Tabacco Use: A Pilot Study.” Clinical Epigenetics 9:81. [10.1186/s13148-017-0381-z]
  37. Ha, Kyungsik, Hong-Gee Kim, and Hwajin Lee. 2017. “Chromatin Marks Shape Mutation Landscape at Early Stage of Cancer Progression.” NPJ Genomic Medicine 2:9. [10.1038/s41525-017-0010-y]
  38. Kim, Pil-Jong, Hong-Gee Kim, Gyu-Jeong Noh, Yong-Seo Koo, and Teo Jeon Shin. 2017. “Disruption of Frontal-Parietal Connectivity during Conscious Sedation by Propofol Administration.” Neuroreport 28(14):896–902. [/10.1097/WNR.0000000000000853]
  39. Kim, Pil-Jong, Ji Y. Park, Hong-Gee Kim, Yong Mee Cho, and Heounjeong Go. 2017. “Dishevelled Segment Polarity Protein 3 (DVL3): A Novel and Easily Applicable Recurrence Predictor in Localised Prostate Adenocarcinoma.” BJU International 120(3):343–50. [10.1111/bju.13783]
  40. Kim, Yee Suk, Sungin Lee, Nansu Zong, and Jimin Kahng. 2017. “Clinical Progress of Human Papillomavirus Genotypes and Their Persistent Infection in Subjects with Atypical Squamous Cells of Undetermined Significance Cytology: Statistical and Latent Dirichlet Allocation Analysis.” Experimental and Therapeutic Medicine 13(6):3032–38. [10.3892/etm.2017.4295]
  41. Ryu, Ji-Ho, Pil-Jong Kim, Hong-Gee Kim, Yong-Seo Koo, and Teo Jeon Shin. 2017. “Investigating the Effects of Nitrous Oxide Sedation on Frontal-Parietal Interactions.” Neuroscience Letters 651:9–15. [10.1016/j.neulet.2017.04.036]
  42. Zong, Nansu, Hong-Gee Kim, and Sejin Nam. 2017. “Constructing Faceted Taxonomy for Heterogeneous Entities Based on Object Properties in Linked Data.” Data & Knowledge Engineering 112:79–93. [10.1016/j.datak.2017.09.006]
  43. Zong, Nansu, Sungin Lee, Jinhyun Ahn, and Hong-Gee Kim. 2017. “Supporting Inter-Topic Entity Search for Biomedical Linked Data Based on Heterogeneous Relationships.” Computers in Biology and Medicine 87:217–29. [10.1016/j.compbiomed.2017.05.026]
  44. Hong, Mihee, Yoon-Ah Kook, Myeng-Ki Kim, Jae-Il Lee, Hong-Gee Kim, and Seung-Hak Baek. 2016. “The Improvement and Completion of Outcome Index: A New Assessment System for Quality of Orthodontic Treatment.” Korean Journal of Orthodontics 46(4):199–211. [10.4041/kjod.2016.46.4.199]
  45. Nam, Sejin, Senator Jeong, Sang-Kyun Kim, Hong-Gee Kim, Victoria Ngo, and Nansu Zong. 2016. Structuralizing Biomedical Abstracts with Discriminative Linguistic Features.” Computers in Biology and Medicine 79:276–85. [10.1016/j.compbiomed.2016.10.026]
  46. Ahn, Jinhyun, Dong-Hyuk Im, and Hong-Gee Kim. 2015. “SigMR: MapReduce-Based SPARQL Query Processing by Signature Encoding and Multi-Way Join.” The Journal of Supercomputing 71(10):3695–3725. [10.1007/s11227-015-1459-z]
  47. Cheong, Taek-Chin, Eon Pil Shin, Eun-Kyung Kwon, Ji-Hye Choi, Kang-Kyun Wang, Prashant Sharma, Kyong Hoon Choi, Jin-Muk Lim, Hong-Gee Kim, Keunhee Oh, Ju-Hong Jeon, Insuk So, In-Gyu Kim, Myung-Sik Choi, Young Keun Kim, Seung-Yong Seong, Yong-Rok Kim, and Nam-Hyuk Cho. 2015. “Functional Manipulation of Dendritic Cells by Photoswitchable Generation of Intracellular Reactive Oxygen Species.” ACS Chemical Biology 10(3):757–65. [10.1021/cb5009124]
  48. Kahng, Jimin, Eung-Hee Kim, Hong-Gee Kim, and Wonbae Lee. 2015. “Development of a Cervical Cancer Progress Prediction Tool for Human Papillomavirus-Positive Koreans: A Support Vector Machine-Based Approach.” Journal of International Medical Research 43(4):518–25. [10.1177/0300060515577846]
  49. Kim, Eung-Hee, Hong-Gee Kim, Suk-Hyung Hwang, and Sung-In Lee. 2015. “FARM: An FCA-Based Association Rule Miner.” Knowledge-Based Systems 85:277–97. [10.1016/j.knosys.2015.05.013]
  50. Kim, Jeong Han, Hong-Gee Kim, and Hyun Jean Lee. 2015. “The BirdMan: Hybrid Perception.” Digital Creativity 26(1):56–64. [10.1080/14626268.2014.998684]
  51. Kim, Pil-Jong, Hong-Gee Kim, and Byeong-Hoon Cho. 2015. “Evaluation of Electrical Impedance Ratio Measurements in Accuracy of Electronic Apex Locators.” Restorative Dentistry & Endodontics 40(2):113. [10.5395/rde.2015.40.2.113]
  52. Kim, Pil-Jong, Hong-Gee Kim, Gyu-Jeong Noh, Yong-Seo Koo, and Teo Jeon Shin. 2015. “Usefulness of Permutation Entropy as an Anesthetic Depth Indicator in Children.” Journal of Pharmacokinetics and Pharmacodynamics 42(2):123–34. [10.1007/s10928-015-9405-5]
  53. Park, Heon-Mook, Pil-Jong Kim, Hong-Gee Kim, Sukwha Kim, and Seung-Hak Baek. 2015. “Prediction of the Need for Orthognathic Surgery in Patients With Cleft Lip and/or Palate.” Journal of Craniofacial Surgery 26(4):1159–62. [10.1097/SCS.0000000000001605]
  54. Zong, Nansu, Sungin Lee, and Hong-Gee Kim. 2015. “Discovering Expansion Entities for Keyword-Based Entity Search in Linked Data.” Journal of Information Science 41(2):209–27. [10.1177/0165551514562704]
  55. Zong, Nansu, Sejin Nam, Jae-Hong Eom, Jinhyun Ahn, Hyunwhan Joe, and Hong-Gee Kim. 2015. “Aligning Ontologies with Subsumption and Equivalence Relations in Linked Data.” Knowledge-Based Systems 76:30–41. [10.1016/j.knosys.2014.11.022]
  56. Chun, Jung Nyeo, Jin Muk Lim, Young Kang, Eung Hee Kim, Young-Cheul Shin, Hong-Gee Kim, Dayk Jang, Dongseop Kwon, Soo-Yong Shin, Insuk So, and Ju-Hong Jeon. 2014. “A Network Perspective on Unraveling the Role of TRP Channels in Biology and Disease.” Pflugers Archiv : European Journal of Physiology 466(2):173–82. [10.1007/s00424-013-1292-2]
  57. Kumar, Harshit, Sungin Lee, and Hong-Gee Kim. 2014. “Exploiting Social Bookmarking Services to Build Clustered User Interest Profile for Personalized Search.” Information Sciences 281:399–417. [10.1016/j.ins.2014.05.008]
  58. Lee, Soo-Kyoung, Youn-Jung Son, Jeongeun Kim, Hong-Gee Kim, Jae-Il Lee, Bo-Yeong Kang, Hyeon-Sung Cho, and Sungin Lee. 2014. “Prediction Model for Health-Related Quality of Life of Elderly with Chronic Diseases Using Machine Learning Techniques.” Healthcare Informatics Research 20(2):125–34. [10.4258/hir.2014.20.2.125]
  59. Nam, Sejin, Sungin Lee, James G. Boram Kim, and Hong-Gee Kim. 2014. “STEP: An Ontology-Based Smart Clinical Document Template Editing and Production System.” Expert Systems with Applications 41(6):3005–15. [10.1016/j.eswa.2013.10.031]
  60. Kim, Pil-Jong and Byeong-Hoon Cho. 2013. “Application of the Water Subtraction Algorithm in Determining the Degree of Conversion of Self-Etching Adhesives.” The Journal of Adhesive Dentistry 15(6):527–34. [10.3290/j.jad.a29589]
  61. Lee, Soo Kyoung, Bo-Yeong Kang, Hong-Gee Kim, and Youn-Jung Son. 2013. “Predictors of Medication Adherence in Elderly Patients with Chronic Diseases Using Support Vector Machine Models.” Healthcare Informatics Research 19(1):33–41. [10.4258/hir.2013.19.1.33]
  62. Hwang, Suk-Hyung and Eung-Hee Kim. 2012. “An Approach for Mining Folksonomies Based on the Triadic Class Hierarchies.” Advanced Science Letters 9(1):844–49. [10.1166/asl.2012.2510]
  63. Kim, Youngah, Hangi Park, Hong-Gee Kim and Yong Oock Kim. 2012. “The Development of Medical Record Items: A User-Centered, Bottom-up Approach.” Healthcare Informatics Research 18(1):10–17. [10.4258/hir.2012.18.1.10]
  64. Kwon, Dongseop, Jong Hwan Yoon, Soo-Yong Shin, Tae-Ho Jang, Hong-Gee Kim, Insuk So, Ju-Hong Jeon, and Hyun Ho Park. 2012. “A Comprehensive Manually Curated Protein-Protein Interaction Database for the Death Domain Superfamily.” Nucleic Acids Research 40(Database issue):D331-6. [10.1093/nar/gkr1149]
  65. Lee, Kang-Pyo, Hong-Gee Kim, and Hyoung-Joo Kim. 2012. “A Social Inverted Index for Social-Tagging-Based Information Retrieval.” Journal of Information Science 38(4):313–32. [10.1177/0165551512438357]
  66. Park, Seon Gyu, Sungin Lee, Myeng-Ki Kim, and Hong-Gee Kim. 2012. “Shared Decision Support System on Dental Restoration.” Expert Systems with Applications 39(14):11775–81. [10.1016/j.eswa.2012.04.074]
  67. Shin, Young-Cheul, Soo-Yong Shin, Jung Nyeo Chun, Hyeon Sung Cho, Jin Muk Lim, Hong-Gee Kim, Insuk So, Dongseop Kwon, and Ju-Hong Jeon. 2012. “TRIP Database 2.0: A Manually Curated Information Hub for Accessing TRP Channel Interaction Network.” PloS One 7(10):e47165. [10.1371/journal.pone.0047165]
  68. Kim, Hak-Lae, John G. Breslin, Stefan Decker, and Hong-Gee Kim. 2011. “Mining and Representing User Interests: The Case of Tagging Practices.” IEEE Transactions on Systems, Man, and Cybernetics – Part A: Systems and Humans 41(4):683–92. [10.1109/TSMCA.2011.2132709]
  69. Lee, Soo Kyoung, Senator Jeong, Hong Gee Kim, and Young Hee Yom. 2011. “A Social Network Analysis of Research Topics in Korean Nursing Science.” Journal of Korean Academy of Nursing 41(5):623–32. [10.4040/jkan.2011.41.5.623]
  70. Lee, Sungin, Senator Jeong, Hong-Gee Kim, Hanmin Jung, Mikyoung Lee, Seungjae Song, and Beom-Jong You. 2011. “OntoPipeliner: An Ontology-Based Automatic Semantic Service Pipeline Generator.” Expert Systems with Applications 38(8):9472–82. [10.1016/j.eswa.2011.01.152]
  71. Song, Seung-Jae, Eung-Hee Kim, Hong-Gee Kim, and Harshit Kumar. 2011. “Query-Based Association Rule Mining Supporting User Perspective.” Computing 93(1):1–25. [10.1007/s00607-011-0148-x]
  72. Jeong, Senator and Hong-Gee Kim. 2010. “Intellectual Structure of Biomedical Informatics Reflected in Scholarly Events.” Scientometrics 85(2):541–51. [10.1007/s11192-010-0166-z]
  73. Jeong, Senator and Hong-Gee Kim. 2010. “SEDE: An Ontology for Scholarly Event Description.” Journal of Information Science 36(2):209–27. [10.1177/0165551509358487]
  74. Jeong, Senator, Soo Kyoung Lee, and Hong-Gee Kim. 2010. “Knowledge Structure of Korean Medical Informatics: A Social Network Analysis of Articles in Journal and Proceedings.” Healthcare Informatics Research 16(1):52–59. [10.4258/hir.2010.16.1.52]
  75. Son, Youn-Jung, Hong-Gee Kim, Eung-Hee Kim, Sangsup Choi, and Soo-Kyoung Lee. 2010. “Application of Support Vector Machine for Prediction of Medication Adherence in Heart Failure Patients.” Healthcare Informatics Research 16(4):253–59. [10.4258/hir.2010.16.4.253]
  76. Zheng, Hai-Tao, Charles Borchert, and Hong-Gee Kim. 2010. “GOClonto: An Ontological Clustering Approach for Conceptualizing PubMed Abstracts.” Journal of Biomedical Informatics 43(1):31–40. [10.1016/j.jbi.2009.07.006]
  77. Jeong, Senator, Sungin Lee, and Hong-Gee Kim. 2009. “Are You an Invited Speaker? A Bibliometric Analysis of Elite Groups for Scholarly Events in Bioinformatics.” Journal of the American Society for Information Science and Technology 60(6):1118–31. [10.1002/asi.21056]
  78. Kang, Bo-Yeong, Dae-Won Kim, and Hong-Gee Kim. 2009. “Two-Phase Chief Complaint Mapping to the UMLS Metathesaurus in Korean Electronic Medical Records.” IEEE Transactions on Information Technology in Biomedicine : A Publication of the IEEE Engineering in Medicine and Biology Society 13(1):78–86. [10.1109/TITB.2008.2007103]
  79. Kim, Bo-Mi, Bo-Yeong Kang, Hong-Gee Kim, and Seung-Hak Baek. 2009. “Prognosis Prediction for Class III Malocclusion Treatment by Feature Wrapping Method.” The Angle Orthodontist 79(4):683–91. [10.2319/071508-371.1]
  80. Kim, Haklae, John G. Breslin, Stefan Decker, Jaehwa Choi, and Honggee Kim. 2009. “Personal Knowledge Management for Knowledge Workers Using Social Semantic Technologies.” International Journal of Intelligent Information and Database Systems 3(1):28. [10.1504/IJIIDS.2009.023036]
  81. Zheng, Hai-Tao, Charles Borchert, and Hong-Gee Kim. 2009. “Exploiting Corpus-Related Ontologies for Conceptualizing Document Corpora.” Journal of the American Society for Information Science and Technology 60(11):2287–99. [10.1002/asi.21145]
  82. Zheng, Hai-Tao, Bo-Yeong Kang, and Hong-Gee Kim. 2009. “Exploiting Noun Phrases and Semantic Relationships for Text Document Clustering.” Information Sciences 179(13):2249–62. [10.1016/j.ins.2009.02.019]
  83. ZHENG, H., B. KANG, and H. KIM. 2008. “An Ontology-Based Approach to Learnable Focused Crawling.” Information Sciences 178(23):4512–22. [10.1016/j.ins.2008.07.030]
  84. Hwang, Suk-Hyung, Hong-Gee Kim, Myeng-Ki Kim, Sung-Hee Choi, and Hae-Sool Yang. 2006. “A Data-Driven Approach to Constructing an Ontological Concept Hierarchy Based on the Formal Concept Analysis.” Pp. 937–46 in. [10.1007/11751632_101]
  85. Kim, Hong-Gee, Byung-Hyun Ha, Jae-Il Lee, and Myeng-Ki Kim. 2005. “A Multi-Layered Application for the Gross Description Using Semantic Web Technology.” International Journal of Medical Informatics 74(5):399–407. [10.1016/j.ijmedinf.2004.10.002]
  86. Kim, Hong-Gee. 1997. “A Psychologically Plausible Logical Model of Conceptualization.” Minds and Machines 7(2):249–67. [10.1023/A:1008234817601]
  87. Kim, Hak-Lae, Simon Scerri, Alexandre Passant, John Breslin, and Hong-Gee Kim. 2011. “Integrating Tagging into the Web of Data: Overview and Combination of Existing Tag Ontologies.” Journal of Internet Technology 12(4):561–72. [LINK]
  88. Kumar, Harshit, Pil Seong Park, Soo-Mi Yang, and Hong-Gee Kim. 2011. “An Ontological Approach to Partnership Establishment.” International Journal on Information 14(5):1803–24. [LINK]
  89. Hong-Gee Kim. (2004). “Markup Languages, Berkshire Encyclopedia of Human-Computer lnteraction.” Berkshire Publishing, 449-452. [LINK]

International Conference Publications

  1. Xianghong Xu, Kai Ouyang, Liuyin Wang, Jiaxin Zou, Yanxiong Lu, Hai-Tao Zheng, Hong-Gee Kim: Modeling Latent Autocorrelation for Session-based Recommendation. CIKM 2022: 4605-4609. [10.1145/3511808.3557645]
  2. Xianghong Xu, Kai Ouyang, Yin Zheng, Yanxiong Lu, Hai-Tao Zheng & Hong-Gee Kim. Diversify Search Results Through Graph Attentive Document Interaction. DASFAA 2022: Database Systems for Advanced Applications: 27th International Conference. Apr 2022. link
  3. Sungmin Yang, Hyunwhan Joe, Sung kwon Yang, Hong-Gee Kim. CICO:Chemically Induced Carcinogenesio Ontology. JIST2019: The 9th Joint International Semantic Technology Conference. NOV 2019.
  4. Hyunwoong Ko, Taehyeong Kim, Jung-Joon Ihm, and Hong-Gee Kim. Cognitive Profiling in Alzheimer’s Disease and Clinical Utility Compared to Structural MRI Imaging Based on Machine Learning Approach. 2019 31ST Association for Psychological Science, Annual Convention. MAY 2019.
  5. Hyunwoong Ko, Yongmin Shin, Seungmin Kim, and Jung-Joon Ihm. Cognitive Appraisal Can Predict Altruistic Behaviors in Korean Medical and Dental Students. 2019 31ST Association for Psychological Science, Annual Convention. MAY 2019.
  6. Hyunwoong Ko, Taehyeong Kim, Jung-Joon Ihm, and Hong-Gee Kim, Harvard Aging Brain Study. Cortical Thickness Profiling Related to Cerebral Beta-Amyloid Burden Using Machine Learning Approach. Annual Alzheimer’s Imaging ConsortiumI (AIC).JUL 13,2019. Los Angeles, US
  7. Hyunwoong Ko, Taehyeong Kim, Jung-Joon Ihm, and Hong-Gee Kim, Harvard Aging Brain Study. Cortical Thickness Profiling Related to Cerebral Beta-Amyloid Burden Using Machine Learning Approach. Annual Alzheimer’s Association International Conference(AAIC 2019). JUL 12-18,2019. Los Angeles, US
  8. Taehyeong Kim, Seung Hee Yang, Hyunwoong Ko, Sungjae Cho, Jun-Young Lee, Byoung-Tak Zhang. Recognizing Emotions from Out-of-domain Facial Expressions Produced by Non-Actors. International Conference on Computer Vision (ICCV): Real-World Recognition from Low-Quality Images and Videos (RLQ). OCT 2019. link
  9. Junho Park, Hong-Gee Kim. Biological Interaction Data Model Development for Heterogeneous Data Integration. The Sixteenth Asia Pacific Bioinformatics Conference. JAN 2018. link
  10. Jinhyun Ahn, Eung-Hee Kim, Munhwan Lee, Jinuk Jung, Junho Park, and Hong-Gee Kim. A Design of DrugBank to BioPAX Converter. The Sixteenth Asia Pacific Bioinformatics Conference. JAN 2018. link
  11. Kyungsik Ha, Junho Park, Hyunwhan Joe, Hwajin Lee, and Hong-Gee Kim. The systematic model of drug repositioning considering disease type and epigenetic features. The Sixteenth Asia Pacific Bioinformatics Conference. JAN 2018. link
  12. Jin-Muk Lim, Yong-Sun Shim, Jiwon Son, and Hong-Gee Kim. Fucosylation pathway genes are associated with patients survival late in early-stage non-small cell lung cancer. The Sixteenth Asia Pacific Bioinformatics Conference. JAN 2018. link
  13. Sung Min Yang, Yong Sun Shim, Hye Yeon Kim, and Hong-Gee Kim. Development of User-Configurable NGS Pipeline System. The Sixteenth Asia Pacific Bioinformatics Conference. JAN 2018. link
  14. Mun-Hwan Lee, Eung-Hee Kim, Jinhyun Ahn, Jinuk Jung, Junho Park and Hong-Gee Kim. Predicting Compound-Protein Interaction with Neural Networks based Pairwise Model. The Sixteenth Asia Pacific Bioinformatics Conference. JAN 2018. link
  15. Mun-Hwan Lee, Eung-Hee Kim, Yong-Ju Lee, and Hong-Gee Kim. Transferable neural networks architecture for low data drug discovery. 11th International Conference on Chemical Structures. MAY 2018.
  16. Hyunwoong Ko, Hong-Gee Kim. Alzheimer’s Disease Neuroimaging Initiative. Machine Learning Approaches For Identifying Amyloid Positivity Based On Neuropsychological Test Performance With Demographics In Nondemented Population. Annual Alzheimer’s Association International Conference. JUL 2018. link
  17. Hyunwoong Ko, Taehyeong Kim, Ko Jung-Joon Ihm, and Hong-Gee Kim. Building Cost-effective Model For Predicting β-Amyloid Burden by Combination of Cortical Thickness, Volume, and Neuropsychological Assessment Measures. 2018 International Conference on Information and Communication Technology Convergence. OCT 2018. link
  18. Junho Park, Sungkwon Yang, and Hong-Gee Kim. Integrated semantic model for complex disease network (Short Paper). The 8th Joint International Semantic Technology Conference. NOV 2018.
  19. Sung Min Yang, Hong-Gee Kim. Semantic Navigation of disease-specific Pathways: The case of Non-small cell lung cancer(NSCLC). The 8th Joint International Semantic Technology Conference. NOV 2018. link
  20. Hyunwhan Joe, Sungkwon Yang, Yongsun Shim, Sueun Jang, and Hong-Gee Kim. Extending DUDES for ranked template generation. The 7th Joint International Semantic Technology Conference. NOV 2017. link
  21. Yongju Lee, Sungkwon Yang, Sueun Jang, and Hong-Gee Kim. Formation of Information Need as a Questioning: A Conceptual Representation for Semantic Web based QA System. The 7th Joint International Semantic Technology Conference. NOV 2017. link
  22. Yongsun Shim, Sungkwon Yang, Hyunwhan Joe, and Hong-Gee Kim. Graph-based Entity Linking using Shortest Path. The 7th Joint International Semantic Technology Conference. NOV 2017. link
  23. Sungkwon Yang, Yongju Lee, Hyunwhan Joe, and Hong-Gee Kim. A Method for Building Ontology Property Explanations. The 7th Joint International Semantic Technology Conference. NOV 2017. link
  24. Sueun Jang, Hyunwhan Joe, Yongju Lee, and Hong-Gee Kim. Question answering as a Language-game. The 7th Joint International Semantic Technology Conference. NOV 2017. link
  25. Jinhyun Ahn, Dong-Hyuk Im, Taewhi Lee, and Hong-Gee Kim. Parallel Prime Number Labeling of Large XML Data Using MapReduce. 6th International Conference on IT Convergence and Security (ICITCS). SEP 2016. link
  26. Jinhyun Ahn. Optimization Techniques for 2-hop Labeling of Dynamic Directed Acyclic Graphs. Proceedings of the Doctoral Consortium at the 15th International Semantic Web Conference (ISWC). OCT 2016. link
  27. Junho Park, Min-Ji Kim, Eung-Hee Kim, Sungkwon Yang, Sungin Lee, Jin-Muk Lim, Hyunwhan Joe, Kyung-Sik Ha, and Hong-Gee Kim. BiDIP: a Biological Data Integration Platform for Transcriptome Analysis. Proceedings of the First International Workshop on Biomedical Data Integration and Discovery (BMDID). OCT 2016. link
  28. Jinhyun Ahn, Dong-Hyuk Im, and Hong-Gee Kim. A MapReduce-Based Approach for Prefix-Based Labeling of Large XML Data. Semantic Technology. Joint International Semantic Technology Conference (JIST), Lecture Notes in Computer Science, Springer, 10055:83-98. NOV 2016. link
  29. Jinhyun Ahn, Jae-Hong Eom, Sejin Nam, Nansu Zong, Dong-Hyuk Im, and Hong-Gee Kim, ‘A Design of Federated SPARQL Engine for Temporal Query Processing’, World Congress on Information Technology Application and Services, FEB 2015.
  30. Sungkwon Yang, Hyunwhan Joe and Hong-Gee Kim. A Model for Explaining Ontology Properties based on PropBank. The 5th Joint International Semantic Technology (JIST) conference, NOV 2015. Yichang, Hubei. (Demo Track)
  31. Gayathri Nadarajan, Kyungsik Ha and Hong-Gee Kim. Modelling Mutation Analysis for Epigenomics with Planning and Semantics. The 5th Joint International Semantic Technology (JIST) conference, NOV 2015. Yichang, Hubei. (SEMBI Workshop)
  32. Jun-ho Park, Hyunwhan Joe, Hyeyeon Kim, Kyungsik Ha, Eung-Hee Kim, and Hong-Gee Kim. Data Platform Development for Biological Interaction Data Integration. The 26th International KOGO Annual Conference. SEP 2017. link
  33. Jun-Ho Park. Kyung-Sik Ha. Hong-Gee Kim. The 24th KOGO Annual Conference 2015, Integration of PPIs Database Using PSI-MI Format. SEP 2015.
  34. Jinhyun Ahn, Dong-Hyuk Im, Jae-Hong Eom, Nansu Zong, and Hong-Gee Kim. G-Diff: A Grouping Algorithm for RDF Change Detection on MapReduce. The 4th Joint International Semantic Technology (JIST) conference. NOV 2014. link
  35. Hyeon Sung Cho, Rock Won Kim, Yun Kyeong Park, Jong Hyeon Park, Hong-Gee Kim, Adverse Drug Event Mining Using Mobile Phone. International Conference on ICT Convergence 2013, October 14-16, 2013, Jeju Island, Korea. link
  36. Se-Jin Nam, Jinhyun Ahn, Jin-Muk Lim, Jae-Hong Eom, Ju-Hong Jeon, and Hong-Gee Kim, Federating Heterogeneous Biological Resources on the Web: A Case Study on TRP Channel Ontology Construction. The 3rd Joint International Semantic Technology (JIST) conference, November 28-30, 2013, Seoul, Korea. link
  37. Nansu Zong, Sungin Lee, and Hong-Gee Kim, A Comparison of Unsupervised Taxonomical Relationship Induction Approaches for Building Ontology in RDF Resources. The 3rd Joint International Semantic Technology (JIST) conference, November 28-30, 2013, Seoul, Korea. link
  38. Sejin Nam, Sungin Lee, James G. Boram Kim, Hong-Gee Kim, Ontology-Based Reusable Clinical Document Template Production System, Conference of the European Federation for Medical Informatics, 2012. link
  39. Nansu Zong, Dong-Hyuk Im, Sungkwon Yang, Hyun Namgoong, Hong-Gee Kim, Dynamic Generation of Concepts Hierarchies for Knowledge Discovering in Bio-medical Linked Data Sets. ACM International Conference on Ubiquitous Information Management and Communication (ACM ICUIMC 2012) , Kuala Lumpur, Malaysia, February 20-22, 2012. link
  40. Dong-Hyuk Im, Nansu Zong, Eung-Hee Kim, Seokchan Yun, Hong-Gee Kim, A Hypergraph-based Storage Policy for RDF Version Management System. ACM International Conference on Ubiquitous Information Management and Communication (ACM ICUIMC 2012) , Kuala Lumpur, Malaysia, February 20-22, 2012. link
  41. Harshit Kumar, Hong-Gee Kim: Using Folksonomies for Building User Interest Profile.UMAP 2011: 438-441 link
  42. Harshit Kumar, Pil Seong Park, Hong Gee Kim, Using Folksonomies for Building User Preference List, ISPA 2011. link
  43. Dong-Hyuk Im, Jinhyun Ahn, Nansu Zong, Jinuk Jung, and Hong-Gee Kim “Link-Diff: Change Detection Tool for Linked Data using MapReduce Framework” The 1st International Workshop on Big data for Knowledge Engineering in The 2nd Joint International Semantic Technology Conference, Dec 2 – 4, 2012, Nara, Japan.
  44. Nansu Zong, Dong-Hyuk Im, Jinhyun Ahn, Jinuk Jung, and Hong-Gee Kim “MixRank: A Framework for Personalized Linked Data Search” The 1st International Workshop on Big data for Knowledge Engineering in The 2nd Joint International Semantic Technology Conference, Dec 2 – 4, 2012, Nara, Japan
  45. Jin-Muk Lim, Jung Nyeo Chun, Hong-Gee Kim, Ju-Hong Jeon, The role of TRP channel interactome in prostate cancer. Translational Bioinformatics Conference, Oct 13, 2012.
  46. Jung Nyeo Chun, Hyeon Sung Cho, Jin Muk Lim, Insuk So, Hong-Gee Kim, Ju-Hong Jeon, Transitive Regulation of TRP Channels by microRNAs, KOGO Annual Conference, Seoul, Korea, September 13-14, 2012
  47. Eung-Hee Kim, Hong-Gee Kim, Suk-Hyung Hwang, A FCA-based Approach to Enrich Users’ Knowledge Base, 2011 IEEE International conference on Granular Computing (GrC 2011), 318-323, Kaohsiung, Taiwan, Nov.8-10, 2011. link
  48. Jeong-Suk Yoo, Soo-Kyoung Lee, Se-Jin Nam, Hong-Gee Kim, Ph.D. Development of user’s annotation centered smart data management system based on ontology for dynamic EMR. 2011, Nov 12. The Korean Society of Medical Informatics Fall Conference. Gachon University, Incheon, Korea. (Poster presentation)
  49. Soo-Kyoung Lee, Jin-Muk Lim, Jae-Il Lee, Hong-Gee Kim. Development of u-Health Standard Terminology for Activating u-Health Services. 2011, June 24. The Korean Society of Medical Informatics Spring Conference. Kyung Hee University, Seoul, Korea. (Poster presentation)
  50. Mina Song, Jinuk Jung, Hyun Namgoong, Kyungmin Lee, Hong Gee Kim, WeBook : An Information Retrieval Service based-on Semantic Knowledge Structures for Learners, Proc. of the Annual International Conference on Web Technologies and Internet Applications (WebTech 2011), 30-34. ISBN : 978-981-08-8227-3, doi:10.5176/978-981-08-8227-3 WebTech25. link
  51. Sungkwon Yang, Eunghee Kim, HyoungJae Park, Nansu Zong, Hong Gee Kim, Relationship-based Interactive Query Expansion, Proc. of the Annual International Conference on Web Technologies and Internet Applications (WebTech 2011), 35-38. ISBN : 978-981-08-8227-3, doi:10.5176/978-981-08-8227-3 WebTech27. link
  52. Hyun Namgoong, KyungMin Lee, HyoungJae Park, Sungkwon Yang, Hong Gee Kim, User Profile Construction for Recommendation System with use of Social Web Sites, Proc. of the Annual International Conference on Web Technologies and Internet Applications (WebTech 2011), 25-29. ISBN : 978-981-08-8227-3, doi:10.5176/978-981-08-8227-3 WebTech25. link
  53. Seokchan Yun, Heungseok Do, Jinuk Jung, Mina Song, Namgoong Hyun, Hong Gee Kim, Analysis of User Interactions in Online Social Networks, Proc. of the Annual International Conference on Social Computing and Behavioral Modelling (SocialComp 2011), 27-29. ISBN : 978-981-08-8227-3, doi:10.5176/978-981-08-8227-3 SocialComp10.
  54. Harshit Kumar, Pil Seong Park, Hong Gee Kim, Building a Partnership ontology for Supplier Selection, RACS 2010, ACM SIGAPP, Oct 27-30 2010, Atlanta, GA, USA.
  55. Hee-Jung Park, Eung-Hee Kim, Harshit Kumar, Jun-Hyup Lee, Hong-Gee Kim, Ki-Tae Koo, Yang-Jo Seol, Yong-Moo Lee, Young Ku, In-Chul Rhyu, Chong-Pyoung Chung, Tae-Il Kim, “Comparison of Logistic regression and Support vector machine methods for the prediction of scaling experience”, poster presented at International Congress of Periodentology, Nov 27-28 2010 , Seoul Korea
  56. Sungin Lee, Seung-Jae Song, SoonJeong Koh, Soo Kyoung Lee, Hong-gee Kim, National Medical Terminology Server in Korea, The First International Conference on Security-enriched Urban Computing and Smart Grid. 15-17th Sep 2010.
  57. Senator Jeong, Seung-Jae Song, Sungin Lee, SooKyoung Lee, and Hong-Gee Kim. Ontological Approach to Clinical Recording and Form Generation: A proof of concept. The 13th World Congress on Medical and Health Informatics(MedInfo 2010). 12-15th September 2010. Cape Town, South Africa.
  58. Sungin Lee, Senator Jeong, Sookyoung Lee, Seungjae Song, Hong-Gee Kim. (2010). LexCare Suite: Korean National Terminology Server for Interoperable EHR. The 13th World Congress on Medical and Health Informatics (MedInfo 2010). 12-15th September 2010. Cape Town, South Africa.
  59. Seungjae Song, Sungin Lee, Senator Jeong, Myungki Kim, Hong-Gee Kim. (2010). Enhanced Mapping Method for Medical Terminology. The 13th World Congress on Medical and Health Informatics (MedInfo 2010). 12-15th September 2010. Cape Town, South Africa.
  60. Seokchan Yun, Mina Song, Hyun Namgung, Sungkwon Yang, Harshit Kumar, Hong-Gee Kim, IMPROVING THE WORKFLOW OF SEMANTIC WEB PORTALS USING M/R IN CLOUD PLATFORM KEOD2010(International Conference on Knowledge Engineering and Ontology Development), Proceedings of the International Conference on Knowledge Engineering and Ontology Development 485-488.
  61. Hyun Namgoong, Harshit Kumar, Hong-Gee Kim, MITIGATION OF LARGE-SCALE RDF DATA LOADING WITH THE EMPLOYMENT OF A CLOUD COMPUTING SERVICE, KEOD2010(International Conference on Knowledge Engineering and Ontology Development), Proceedings of the International Conference on Knowledge Engineering and Ontology Development 489-492.
  62. Benjamin Heitmann, James G. Kim, Alexandre Passant, Conor Hayes, and Hong-Gee Kim. 2010. An architecture for privacy-enabled user profile portability on the Web of Data. In Proceedings of the 1st International Workshop on Information Heterogeneity and Fusion in Recommender Systems (Barcelona, Spain, September 26, 2010). HetRec ’10. ACM, New York, NY, 16-23. DOI:10.1145/1869446.1869449
  63. Seok Chan Yun, Sung Hun Kim, & Hong-Gee Kim. (2009). Improving coursework for Web Engineering based on MVC pattern. Paper presented at the WebSci 09: Society On-Line, Athens, Greece, 18-20.
  64. Hak Lae Kim, J. Scerri, John G. Breslin, Stefan Decker, & Hong-Gee Kim. (2009). Analysis and Representation of Tagging Practices in Online Communities. Paper presented at the In AAAI 2009 Spring Symposium on Social Semantic Web: Where Web 2.0 Meets Web 3.0 Stanford University., CA. USA.
  65. Hai-Tao Zheng, Bo Yeong Kang, & Hong-Gee Kim. (2008). Learnable Focused Crawling Based on Ontology. Paper presented at the Asia Information Retrieval Symposium.
  66. Hai-Tao Zheng, Borchert, C. Hong-Gee Kim. (2008). Exploiting Gene Ontology to Conceptualize Biomedical Document Collections, 3th Proceeding of Asia Semantic Web Conference, Bangkok, Thailand, (LNCS Vol.) 2008, 375-389
  67. Hai-Tao Zheng, Borchert, C., & Hong-Gee Kim. (2008). A Concept-Driven Automatic Ontology Generation Approach for Conceptualization of Document Corpora. Paper presented at the 2008 IEEE/WIC/ACM International Conference on Web Intelligence and Intelligent Agent Technology, Sydney, Australian.
  68. Hyun Namgoong, Yang, K.-M., Sung-Kwon Yang, Borchert, C., & Hong-Gee Kim. (2008). STAN: Social, Trusted Annotation Network. Paper presented at the Asian Semantic Web Conference.
  69. Hak Lae Kim, J. Scerri, John G. Breslin, Stefan Decker, & Hong-Gee Kim. (2008). The State of the Art in Tag Ontologies: A Semantic Model for Tagging and Folksonomies. Paper presented at the Dublin Core Conference 2008, Berlin, Germany.
  70. Hak Lae Kim, John G. Breslin, Sung-Kwon Yang, Song, S., & Hong-Gee Kim. (2008). int.ere.st: Building a Tag Sharing Service with the SCOT Ontology. Paper presented at the Twenty-Third AAAI Conference on Artificial Intelligence(AAAI-08).
  71. Hak Lae Kim, John G. Breslin, Sung-Kwon Yang, & Hong-Gee Kim. (2008). Social semantic cloud of tag: Semantic model for social tagging. Paper presented at the 12th International Conference on Knowledge-Based and Intelligent Information & Engineering Systems(KES2008).
  72. Senator Jeong (2008). Toward Scholarly Event Digital Library Services. Bulletin of IEEE Technical Committee on Digital Libraries. Fall 2008;4(2).
  73. Hong-Gee Kim, Byung-Hyun Ha, Jae-il Lee, & Myeng Ki Kim. (2007). Narrative Information Processing based on Controlled Natural Language in EMR Systems. International Journal of Medical Informatics.
  74. Hai-Tao Zheng, Bo Yeong Kang, & Hong-Gee Kim. (2007). An ontology-based Bayesian network approach to representing uncertainty in clinical proactic guidelines. Paper presented at the ISWC07/URSW(Uncertainty reasoning for the semantic web workshop).
  75. Park, S. G., Hong-Gee Kim, & Myeng Ki Kim. (2007). Tooth Positional Ontology Represented in OWL. Paper presented at the Poster presented at MEDINFO 2007.
  76. Hyun Namgoong, & Hong-Gee Kim. (2007). Ontology-Based Controlled Natural Language Editor Using CFG with Lexical Dependency. Paper presented at the International Semantic Web Conference.
  77. Hyun Namgoong, Senator Jeong, Hong-Gee Kim, Dong Hwan Lee, Young Won Nam, & Myeng Ki Kim. (2007). Open platform for A Longitudinal Study in Dental Implant. Paper presented at the Poster presented at MEDINFO 2007.
  78. Hak Lae Kim, Sung-Kwon Yang, Song, S. S., John G. Breslin, & Hong-Gee Kim. (2007). Tag Mediated Society with SCOT Ontology. Paper presented at the 5th Semantic Web Challenge Workshop at The 6th International Semantic Web Conference (ISWC 2007).
  79. Hak Lae Kim, Sung-Kwon Yang, John G. Breslin, & Hong-Gee Kim. (2007). Simple algorithms for representing tag frequencies in the SCOT exporter. Paper presented at the 2007 IEEE/WIC/ACM International Conference on Intelligent Agent Technology(IAT), Silicon Valley, USA.
  80. Hak Lae Kim, Suk-Hyung Hwang, & Hong-Gee Kim. (2007). FCA-based approach for mining contextualized folksonomy. Paper presented at the 2007 ACM symposium on Applied,computing, New York, NY, USA.
  81. Hak Lae Kim, J.H. Choi, Hong-Gee Kim, & Suk-Hyung Hwang (2007). WANT : A Personal Knowledge Management System on Social Software Agent Technologies. Paper presented at the 1st KES Symposium on Agent and Multi-Agent Systems: Technologies and Applications, Springer-Verlag, Berlin Heidelberg.
  82. Hong-Gee Kim, Suk-Hyung Hwang, Yu-Kyung Kang, Hak Lae Kim, & Hae-Sool Yang (2007). An Agent Environment for Contextualizing Folksonomies in a Triadic Context. Paper presented at the 1st KES Symposium on Agent and Multi-Agent Systems: Technologies and Applications, Springer-Verlag, Berlin Heidelberg.
  83. Dong Soon Kim, Suk-Hyung Hwang, & Hong-Gee Kim. (2007). Concept Analysis of OWL Ontology based on the Context Family Model. Paper presented at the International Conference on Convergence Information Technology 2007 (IEEE CS Proceeding).
  84. Bo Yeong Kang, & Hong-Gee Kim. (2007). Web Page Filtering for Domain Ontology with the Context of Concept. IEICE – Trans. Inf. Syst., E90-D(5), 859-862.
  85. Senator Jeong, Grzonkowski, S., Sungin Lee, & Hong-Gee Kim. (2007). Semantically Enhanced Event Description. Paper presented at the 5th Annual Conference on Teaching and Learning.
  86. Hee Chul Choi, Park, S. G., Dong Hwan Lee, Hai-Tao Zheng, & Hong-Gee Kim. (2007). An Interactive Shared Decision Making System for Dental Treatment Planning. Paper presented at the Poster presented at MEDINFO 2007.
  87. Hai-Tao Zheng, Bo Yeong Kang, Sang Ok Koo, Hee Chul Choi, Kwang Sub Kim, & Hong-Gee Kim. (2006). A Semantic Annotation Tool to Extract Instances from Korean Web Documents. Paper presented at the 1st Semantic Authoring and Annotation Workshop of 5th ISWC(International Semantic Web Conference), Athens, GA, USA.
  88. Park, S. G., & Hong-Gee Kim. (2006). Dental decision making on missing tooth represented in an ontology and rules. The Semantic Web – ASWC 2006, 4185, 322-328.
  89. Hak Lae Kim, Hong-Gee Kim, & Stefan Decker (2006). How Semantic Desktop and Web2.0 can help Personal Knowledge Management? Paper presented at the 1st ASWC(Asia Semantic Web Conference) International Conference.
  90. Hak Lae Kim, Hong-Gee Kim, & Stefan Decker (2006). Semantic Documentation Using Semantic Web Technologies and Social Web Services. Paper presented at the NWeSP 2006: International Conference on Next Generation Web Services Practices.
  91. Hak Lae Kim, Hong-Gee Kim, J.H. Choi, & Stefan Decker (2006). Translating Documents into Semantic Documents using Semantic Web and Web 2.0. Paper presented at the 1st Semantic Authoring and Annotation Workshop (SAAW2006) located at the 5th International Semantic Web Conference, Athens, GA, USA.
  92. Hong-Gee Kim, & Hai-Tao Zheng (2006). A Pragmatic View on Developing a Tool for Ontology Integration. Paper presented at the ASWC(Asia Semantic Web Conference) International Conference, Beijing, China.
  93. Bo Yeong Kang, & Hong-Gee Kim. (2006). Document filtering for domain ontology based on concept preferences. Paper presented at the 1st Asian Semantic Web Conference, Lecture Notes in Computer Science.
  94. Senator Jeong, & Hong-Gee Kim. (2006, September 3-7, 2006). Design of Semantically Interoperable Adverse Event Reporting Framework. Paper presented at the First Asian Semantic Web Conference(ASWC2006), Beijing, China.
  95. Senator Jeong, & Hong-Gee Kim. (2006). Ontology based Adverse Event Reporting System Architecture. Paper presented at the World Library and Information Congress: 72nd IFLA General Conference and Council.
  96. Hee Chul Choi, Suk-Hyung Hwang, Dong Soon Kim, Yu-Kyung Kang, Hong-Gee Kim, & Myeng Ki Kim. (2006). Scaling of manyvalued context with FCA-Wizard. Paper presented at the The 5th Asia Pacific International Symposium on Information Technology(APIS2006)
  97. Hai-Tao Zheng, & Hong-Gee Kim. (2004). An easy tool for Ontology integration. Paper presented at the Asian-Pacific Decision Sciences Conference, Seoul, Korea.
  98. Hak Lae Kim, Hong-Gee Kim, & Park, K. M. (2004). Ontalk:Ontology-based Personal Document Management System. Paper presented at the 13th International World Wide Web Conference, New York. USA., .420-421
  99. Hong-Gee Kim, & Hak Lae Kim (2004). Ontology-Based Personal Document Management & Retrieval Systems. Paper presented at the Proceedings of 10th international Conference: Cybernetics and information Technologies, USA.
  100. Hong-Gee Kim, & Hak Lae Kim (2004). Intelligent Ontology-based Personal Document Management & Retrieval System. Paper presented at the Proceeding of 1st International Conference on Cybernetics and Information Technologies, Systems and Applications: CITSA2004, Florida, USA.
  101. Suk-Hyung Hwang, Hong-Gee Kim, & Hae-Sool Yang (2005). A FCA-Based Ontology Construction for the Design of Class Hierarchy. Paper presented at the International Conference on Computational Science and its Applications (ICCSA2005).
  102. Hong-Gee Kim. (1997). Formalizing perspectival defeasible reasoning. Paper presented at the Proceedings of the 30th Hawaii International Conference on System Science.

Domestic Journal

  1. 심용선, 양성권, 김홍기. “개체 링킹을 위한 RDF 지식그래프 기반의 포괄적 상호의존성 짝 연결 접근법.” 정보처리학회논문지, 소프트웨어 및 데이터 공학 8.3:129-136. MAR 2019. link
  2. 안진현, 김응희, 김홍기. 빅데이터 기반 관광지 추천 시스템 구현－한국관광공사 LOD를 중심으로. 대한경영정보학회, 36(4):129-148. NOV 2017. link
  3. 이문환, 김응희, 김홍기. 약물-표적 단백질 연관관계 예측모델을 위한 쌍 기반 뉴럴네트워크. 인지과학, 28(4):299-314. DEC 2017. link
  4. 김예은, 김인형, 김지영, 김지혜, 박영준, 신성찬, 임진묵, 이현진, 전수진, 김홍기. 다이나믹 정보 디자인을 활용한 단백질 네트워크 시각화 연구. 디자인융복합학회, 14(2):89-104. APR 2015. link
  5. 이민아, 정진욱, 김응희, 김홍기,빅데이터 활용을 위한 클라우드 기반의 링크드 데이터 인덱싱 시스템,한국 정보 처리 학회,2013
  6. 윤석찬, 남궁현, 양성권, 김홍기, 빅데이터 기반 대용량 시맨틱 웹 검색 기술 동향, 한국통신학회지(정보와통신) 29(11), 2012.10, 24-29
  7. 손연정, 강보영, 김홍기, 이수경, Support Vector Machine을 이용한 노인 만성질환자의 약물복용 이행 예측, 대한의료정보학회 2012
  8. 이경민, 김홍기, 유정숙, 의무기록 서식의 규칙 표현을 위한 온톨로지 모델링 및 사용성 고려 통제 자연어 입력 인터페이스 구현, 대한의료정보학회 2012
  9. 하경식, 임진묵, 김홍기, miRNA, PPI, Disease 정보의 통합 모델 설계, 한국정보과학회 2012
  10. 이경민, 남궁현, 김응희, 이강용, 김홍기, SNS 사용자간 다차원 상호관계분석(Analysis of multi-dimensional interaction among SNS users), 한국인터넷정보학회논문지, 12(2) 113~122.
  11. 이유진, 양성권, 송민아, & 김홍기. (2009). 시맨틱 디지털도서관 서비스를 위한 서지 온톨로지 구축. 한국정보관리학회, 정보관리학회지, 26(1), 215-230.
  12. 김응희, 황석형, & 김홍기 (2008). 형식개념분석기법을 이용한 사용자 질의 기반의 연관관계 추출 자동화지원도구의 개발. 한국정보처리학회논문지, 15D, 429-440.
  13. Eung Hee Kim, Suk-Hyung Hwang, & Hong-Gee Kim. (2008). On Development of an Automatic Tool for Extracting Association Rules of a user query using Formal Concept Analysis. Korea Information Processing Society.
  14. Hak Lae Kim, & Hong-Gee Kim. (2007). Personal Document System using Semantic Web and Ontology Technologies. Korean Institute of CALS/EC, 12(2).
  15. 하병현, 김홍기, 이재일, & 김명기 (2006). 진료서술문의 구조적인 입력을 위한 온톨로지 기반의 통제자연어와 인터페이스 개발. 대한의료정보학회지, 12, 261-271.
  16. 정상원, & 김홍기 (2006). 온톨로지 기반의 유해사례 보고시스템. 대한의료정보학회지, 12, 9-12.
  17. 김홍기, 강유경, 황석형, & 김동순 (2006). 형식개념분석을 위한 자동화 도구의 개발과 의료분야에서의 적용사례. 정보처리학회눈문지(D), 13-D, 997-1008.
  18. 김명기, 황석형, 김홍기, 강유경, 최희철, & 김동순 (2006). FCA를 이용한 임상서식지의 분류와 체계화. 대한의료정보학회지, 12, 31-43.
  19. 강유경, 황석형, 김홍기, 백승학, 임유리, 김동순, et al. (2006). FCA를 기반으로 하는 치과교정학분야의 임상의사결정지원시스템의 구축. 대한의료정보학회지, 12, 17-20.
  20. Kim, Y., Cho, I., Seo, J. W., Kim, I. K., Hong-Gee Kim, & Choi, Y. H. (2006). Research and Development Efforts Aimed at Implementing Electronic Health Record Systems with Interoperability and Patient Safety. Journal of Korean Society of Medical Informatics, 12-2, 115-132.
  21. Myeng Ki Kim., Suk-Hyung Hwang, Hong-Gee Kim, Yu-Kyung Kang, Hee Chul Choi, & Dong Soon Kim (2006). Classification and Conceptualization of Clinical Documents using Formal Concept Analysis. Korean Society of Medical Informatics, 12(1), 31-43.
  22. Hong-Gee Kim, Yu-Kyung Kang, Suk-Hyung Hwang, & Dong Soon Kim (2006). The Development of an Automatic Tool for Formal Concept Analysis and its Applications on Medical Domain. The KIPS Transactions : Part D, 13-D(7).
  23. Yu-Kyung Kang, Suk-Hyung Hwang, Hong-Gee Kim, Seung Hak Baek., Kim, K. R., Dong Soon Kim, et al. (2006). Development of a FCA-based Clinical Decision Support System for the Cephalometric analysis in the orthodontics field. Korean society of Medical Informatics, 12 Supplement 1, 17-20.
  24. Byung-Hyun Ha, Hong-Gee Kim, Lee, J., & Myeng Ki Kim. (2006). How to Deal with Medical Narratives based on Controlled Natural Language Operated by an Ontology. Journal of Korean Society of Medical Informatics, 12(3), 261-271.
  25. 황석형, 강유경, 김홍기, & 김명기 (2005). FCA를 이용한 임상서식지의 체계화. 대한의료정보학회지, 11.
  26. 이재일, 하병현, 김홍기, & 김명기 (2005). An ontology-based pathology reporting system. Korean society of Medical Informatics, 11(1), 41-45.
  27. 위현욱, 김홍기, 황석형, & 김명기 (2005). 개념격자구조로 표현된 UMLS Visualizer 개발. 대한의료정보학회지, 11, 81-84.
  28. 박순철, 이상범, 김홍기, & 이재일 (2005). 환자의무기록 관리 및 지능형 정보검색 시스템. 대한의료정보학회지, 11, 21-24.
  29. 박순철, 이상범, 김홍기, & 김명기 (2005). 지능형 의료정보 검색시스템 구현. 대한의료정보학회지, 11, 198-202.
  30. 김동범, 김홍기, 양정화, & 송태민 (2005). RDBMS 환경에서 온톨로지 기반의 건강정보 질의 시스템. 대한의료정보학회지, 11, 25-28.
  31. 강유경, 황석형, 최희철, 김동순, 위현욱, 김홍기, et al. (2005). 형식개념분석을 위한 지원도구의 개발. 소프트웨어공학논문집, 8, 47-56.
  32. Yu-Kyung Kang, Suk-Hyung Hwang, Hee Chul Choi, Dong Soon Kim, Wee, H.-W., Hong-Gee Kim, et al. 2005. “Development of a Tool for Formal Concept Analysis. Software Engineering” 8(1-2). 
  33. 강유경, 황석형, 최성희, 최희철, 김동순, 김홍기, et al. (2005). 임상자료로부터 개념계층구조 구축을 위한 형식개념분석 도구의 개발 및 적용. 대한의료정보학회지, 11, 71-76.
  34. Kim, D. B., Hong-Gee Kim, Song, J. H., & M., T. (2005). Ontology-Based Health Information Query system on Relational Database Management System. Journal of Korean society of Medical Informatics, 11(1), 25-28.
  35. Yu-Kyung Kang, Suk-Hyung HwangHee Chul Choi, Dong Soon Kim, Hong-Gee Kim, & Myeng Ki Kim. (2005). Development of a FCA Tool For Building Conceptual Hierarchy of Clinical Data. Korean society of Medical Informatics, 11(2), 71-76.
  36. Suk-Hyung Hwang, Yu-Kyung Kang, Hong-Gee Kim, & Myeng Ki Kim. (2005). A FCA-based Conceptualization of Medical Documents. Journal of Korean society of Medical Informatics, 11(Supplement 1), 53-56.
  37. Hak Lae Kim, & Hong-Gee Kim. (2004). Building an Ontology for Integrating Construction Information Systems. Korean Journal of E-Commerce
  38. Hak Lae Kim, & Hong-Gee Kim. (2004). Building Ontology based on the Unified Construction Information Classification System. The Journal Korean Institute of CALS/EC, 9(3), 95-112 .
  39. Hong-Gee Kim, & Hak Lae Kim (2003). Extension of Service Description in Semantic Web Language. Korean Institute of CALS/EC, 8, 113-129.
  40. Hong-Gee Kim. (1999). Perspectival Knowledge Representation and Dynamic Reasoning. Proceedings of Korean Society for Cognitive Science, 383-389.
  41. Hong-Gee Kim. (2004). Semantic Web Services. Industrial Engineering Magazine, 11, 42-46.
  42. 김홍기. (2000). 지식경영에 있어서 지식의 표현과 메타지식의 역할. IE Interfaces, 2000.03, 13(1), 10-16.

Domestic Conference

  1. 고현웅, 임정준, 김홍기. 머신러닝 기반 인구통계학적 자료 및 신경심리검사 결과를 이용한 알츠하이머병 신경병리 예측모형구축. 2018년 대한의료정보학회 춘계학술대회. JUN 2018.
  2. 안진현, 임동혁, 김홍기. DAG에 대한 2-Hop 레이블 크기를 줄이기 위한 노드 아이디 부여 기법 설계.  2017년 한국정보처리학회 춘계학술발표대회, 24(1): 0831-0832. APR 2017. link
  3. 안진현, 임진묵, 김응희, 이문환, 김홍기. 데이터 기반 신약 탐색을 위한 의생명 빅데이터 통합 및 그래프 기반 분석 기법 개발. 한국컴퓨터종합학술대회. 1637. JUN 2017. link
  4. 안진현, 임진묵, 김응희, 이문환, 김홍기. 데이터 기반 신약 탐색을 위한 의생명 빅데이터 통합 및 그래프 기반 분석 기법 개발. 한국정보과학회 학술발표논문집, 1637-1637. JUN 2017. link
  5. 박준호, 김혜연, 조현환, 김홍기. 생물학적 상호작용 데이터 통합을 위한 데이터 모델 개발. 대한의료정보학회 추계학술대회. NOV 2017. link
  6. 안진현, 임동혁, 김홍기. RDB 뷰 정의로부터 상하위 관계를 추출하는 스파크 기반 시스템 설계. 한국정보처리학회 춘계학술대회. APR 2016. link
  7. 안진현, 양성권, 이문환, 임동혁, 김홍기. Jena-Impala: 임팔라를 활용한 Jena 프레임워크 기반의 트리플 저장소 구현. 한국컴퓨터종합학술대회. JUN 2016. link
  8. 안진현, 양성권, 이문환, 정진욱, 김응희, 임동혁, 김홍기, ‘MongoDB를 활용한 Jena프레임워크 기반의 분산 트리플 저장소 구현’, 한국정보처리학회 추계학술대회,제주한라대학교. SEP 2015.
  9. 이문환,김응희,김홍기.도메인 전문가를 위한 웹기반 선형계획법 인터페이스LODE의 설계 및 구현.한국정보과학회 동계학술대회.Phoenixpark Gangwon. DEC 2015. link
  10. 안진현, 임동혁, 양성권, 이문환, 김홍기. 맵리듀스를 활용한 XML 데이터에 대한 소수 레이블링 알고리즘 설계. 한국산학기술학회추계학술대회. DEC 2015.
  11. 양성권, 조현환, 안진현, 이문환, 김홍기. 온톨로지와 자연어 처리 기술 간의 의미적 격차 해소를 위한 의미적 연결 모델에 대한 연구. 한국산학기술학회추계학술대회. DEC 2015.
  12. 이그리미, 하경식, 전주홍, 김홍기, Measurement model design of the degree of evolution of TRP channels, 대한의료정보학회 추계학술대회 2013.
  13. 하경식, 전주홍, 김홍기, Microarray analysis of the response for cyclosporin A in prostate cancer, 대한의료정보학회 추계학술대회 2013.
  14. 박준호, 임진묵, 김홍기, Microarray analysis for the human carotid atheroma in hypertensive patients, 대한의료정보학회 추계학술대회 2013.
  15. 임진묵, 천정녀, 강영, 김응희, 신영철, 장대익, 권동섭, 신수용, 서인석, 전주홍, 김홍기, A network perspective on unraveling the role of TRP channels in biology and disease, 대한의료정보학회 추계학술대회 2013.
  16. 이수경, 김정은, 손연정, 김홍기, 조현성, Development of Prediction Model for Health-related Quality of Life in Elderly with Chronic Diseases based on Machine Learning, 대한의료정보학회 추계학술대회 2013.
  17. 고순정, 김홍기, Standardized Gastroscopy Report based on Collaborative HL7 and openEHR, 대한의료정보학회 추계학술대회 2013.
  18. 박미정, 임진묵, 김홍기, Protein Interaction network Exchange by ALK Fusion in Non Small Cell Lung Cancer, 대한의료정보학회 춘계학술대회 2013.
  19. 임진묵, 김홍기, Development and Extention of TRP Channel Ontology, 대한의료정보학회 춘계학술대회 2013.
  20. 이그리미, 하경식, 김홍기, TRP Channel Analysis by Hierarchical Clustering, 대한의료정보학회 춘계학술대회 2013.
  21. 하경식, 임진묵, 김홍기, Development of Micro-array Analysis Automation System, 대한의료정보학회 춘계학술대회 2013.
  22. 양상원, 김보람, 남세진, 김홍기, The Evaluation of the Understanding of Growth Charts, 대한의료정보학회 춘계학술대회 2013.
  23. 정진욱, 임동혁, 이경민, 종난수, 김홍기, 시맨틱 웹 매쉬업 서비스를 위한 링크드 데이터 및 OpenAPI 통합 연계 시스템의 설계 및 구현, 한국컴퓨터종합학술대회 2012
  24. 임진묵, 하경식, 김홍기, A Service Platform for MicroRNA Reguration in Human Disease, 대한의료정보학회 추계학술대회 2012.
  25. 하경식, 임진묵, 김홍기, Reinterpretation of Microarray Data using Cluster Analysis, 대한의료정보학회 추계학술대회 2012.
  26. 고순정, 김정은, 김석화, 국민건강보험 건강검진정보기반 맞춤형 개인건강기록 모델, 대한의료정보학회 추계학술대회 2012.
  27. 남궁현, 정진욱, 이강용, 조기성, 김홍기 온라인 포탈 서비스를 활용한 사용자 관심사의 의미적 확장 방법, HCIKorea 2011 Conference
  28. 이경민, 양성권, 김응희, 남궁현, 김홍기 TweetBook: 도서-중심 소셜 마이크로블로깅 시스템의 설계 및 구현, HCIKorea 2011 Conference
  29. Sangsup Choi, Eung-Hee Kim, Byungtae Ahn, Jin-Hun Sohn, Facial Emotion Recognition Using k-NN and SVM. Fall Conference of the Ergonomics Society of Korea , Korea, Nov 1-2, 2012..
  30. 정진욱, 이민아, 김홍기,마이크로 블로그의 주제 도출을 위한 주제체계모델의 활용,한국 HCI 학회,2013. link
  31. 송민아, 남궁현, 정진욱, 김홍기, 윤주현, WeBook: 학습자를 위한 시맨틱 지식구조 기반의 정보검색 서비스(WeBook: A Information Retrieval Service based-on Semantic Knowledge Structures For Learners), HCIKorea 2011 Conference
  32. 남궁현, 김응희, 박형재, 김홍기, 컨텐츠 추천 시스템을 위한 소셜 웹 사이트 기반의 사용자 프로파일 획득 방법(An Approach of User Profile Construction for Recommendation System with use of Social Web Sites), HCIKorea 2011 Conference
  33. 양성권, 정진욱, 윤석찬, 김홍기, 영화 컨텐츠 검색에서의 관계 기반 질의 확장(Relationship-based Query Expansion for Movie Contents Search), HCIKorea 2011 Conference
  34. LexCare Suite ? 의료용어관리서버 구축 프로세스 개발, 고순정, 양정아, 최재혁, 남세진, 김홍기 2010, November 5. 대한의료정보학회 추계학술대회, 연대 세브란스병원, 서울, 한국.(Poster Presentation)
  35. 이수경, 정상원, 김홍기, 염영희. 국내 간호학의 지식구조 분석 및 시각화. 2010, Nov 5. 대한의료정보학회 추계학술대회. 세브란스병원, 서울, 한국. (Poster presentation)
  36. 손연정, 김홍기, 김응희, 이수경. 심부전 환자의 약물복용 이행도 예측을 위한 Support Vector Machine 적용. 2010, June 18. 대한의료정보학회 춘계학술대회. 가톨릭 중앙의료원, 서울, 한국. (Poster presentation)
  37. 고순정, 양정아, 정병철, 이수경. 김홍기. 통합의료용어 관리도구 개발 및 현장적용. 2010, June 18. 대한의료정보학회 춘계학술대회. 가톨릭 중앙의료원, 서울, 한국. (Oral presentation)
  38. 최희철, 송승재, & 김홍기 (2007). 온톨로지와 객체지향 방법론을 이용한 의료보험 수가코드의 상호운용성 개선. 대한의료정보학회 추계학술대회 초록집, 2007, 199.
  39. 남궁현, & 김홍기 (2007). 의료정보시스템을 위한 온톨로지 기반의 한국어 서술문 입력기. 대한의료정보학회 추계학술대회 초록집.
  40. Hai-Tao Zheng, Bo Yeong Kang, Sung-Kwon Yang, & Hong-Gee Kim. (2007). OntoCA: An Ontology-based Clinical Annotation System. Paper presented at the Korean Medical Informatics Conference, Korea.
  41. Hai-Tao Zheng, Bo Yeong Kang, Hyun Namgoong, & Hong-Gee Kim. (2007). Ontology-based focused crawling using neural network. Paper presented at the The 19th Annual Korean Conference of Human Language Technology(HLT2007), DaeGu, Korea.
  42. Dong Soon Kim, Suk-Hyung Hwang, Hong-Gee Kim, & Yang, K. M. (2006). On developing OWL Analyzer based on Formal Concept Analysis. Paper presented at the 26th KIPS Fall conference.
  43. Yu-Kyung Kang, Suk-Hyung Hwang, Hong Gee, K., Seung Hak Baek., Dong Soon Kim, Eung Hee Kim, et al. (2006). Development of a Clinical Decision Support System using Formal Concept Analysis. Paper presented at the 25th KIPS Spring Conference.
  44. Hak Lae Kim, & Hong-Gee Kim. (2004). Ontology-based Electronic Document Retrieval. Paper presented at the KIIS Conference on Focal Motive Power for the Growth and Intelligent Information Technology, Seoul, Korea.
  45. Park, E. J., & Hong-Gee Kim. (2003). Artificial Intelligence and Its Applications: The Study of Business Knowledge Processing using Deontic Logic. Paper presented at the Fall Annual Conference for The Korea Society of Management Information Systems.
  46. Hak Lae Kim, & Hong-Gee Kim. (2003). Semantic Web Technologies for Ubiquitous Services. Paper presented at the 29th International KMIS Conference on Informatization in Ubiquitous Computing Era.
  47. Kim, D. B., Hong-Gee Kim, & Jeon, J. H. (2003). Implementation of Document Retrieval System based Ontology using RQL. Paper presented at the 29th International KMIS Conference on Informatization in Ubiquitous Computing Era.
  48. Shin, G. H., & Hong-Gee Kim. (2002). The present and Future for Digital Management: Methodology and Strategy for Implementation of RossetNet. Paper presented at the Fall Annual Conference for The Korea Society of Management Information Systems.
  49. Hak Lae Kim, & Hong-Gee Kim. (2002). SemanticWeb based e-Business Interoperability. Paper presented at the 26th KMIS Conference on e-Government and e-Biz Strategy toward the global leadership, Seoul, Korea.
  50. Hak Lae Kim, & Hong-Gee Kim. (2002). Evaluating UML and Conceptual Graph as Ontology modeling frameworks. Paper presented at the 27th International KMIS Conference on Re-Shaping of e-Business: Challenges and Opportunities, Seoul, Korea.
  51. Hong-Gee Kim, & Shin, G. H. (2002). An Evaluation-Based Knowledge Management System for Managing Dynamic Knowledge. Paper presented at the Fall Annual Conference for The Korea Society of Management Information Systems.